ACBICI, A Configurable BayesIan Calibration and Inference package
Contents:
Installation
Model calibration: general concepts
Preparing a calibration for ACBICI
Gaussian processes
Implementing a calibration process
Examples
src
ACBICI, A Configurable BayesIan Calibration and Inference package
Index
Index
A
|
B
|
C
|
D
|
E
|
F
|
G
|
H
|
I
|
K
|
L
|
M
|
N
|
P
|
R
|
S
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T
|
U
|
V
|
W
A
ACBICImodel (class in src.ACBICI.calibrator)
addHyperparameter() (src.ACBICI.calibrator.Calibrator method)
addParameter() (src.ACBICI.calibrator.ACBICImodel method)
average_pairwise_distance() (in module src.ACBICI.calibrator)
B
bounds() (src.ACBICI.priors.prior method)
C
calibrate() (src.ACBICI.calibrator.Calibrator method)
(src.ACBICI.calibrator.classicalCalibrator method)
(src.ACBICI.calibrator.discrepancyCalibrator method)
(src.ACBICI.calibrator.expensiveCalibrator method)
(src.ACBICI.calibrator.KOHCalibrator method)
Calibrator (class in src.ACBICI.calibrator)
Cauchy (class in src.ACBICI.priors)
classicalCalibrator (class in src.ACBICI.calibrator)
covarianceMatrix() (src.ACBICI.gprocess.GaussianProcess method)
covarianceMatrix_vect() (src.ACBICI.randomprocess.expensiveGaussianProcess method)
(src.ACBICI.randomprocess.inexpKOHGaussianProcess method)
(src.ACBICI.randomprocess.KOHGaussianProcess method)
(src.ACBICI.randomprocess.randomProcess method)
covarianceMatrix_vect_withdisc() (src.ACBICI.randomprocess.inexpKOHGaussianProcess method)
(src.ACBICI.randomprocess.KOHGaussianProcess method)
covd() (src.ACBICI.calibrator.discrepancyCalibrator method)
(src.ACBICI.calibrator.KOHCalibrator method)
covt() (src.ACBICI.calibrator.expensiveCalibrator method)
(src.ACBICI.calibrator.KOHCalibrator method)
covx() (src.ACBICI.calibrator.expensiveCalibrator method)
(src.ACBICI.calibrator.KOHCalibrator method)
D
DiagonalVBmc (class in src.ACBICI.vbmc)
discrepancyCalibrator (class in src.ACBICI.calibrator)
E
elbo() (src.ACBICI.vbmc.DiagonalVBmc method)
eval() (src.ACBICI.gprocess.GaussianProcess method)
eval_vect() (src.ACBICI.randomprocess.expensiveGaussianProcess method)
(src.ACBICI.randomprocess.inexpKOHGaussianProcess method)
(src.ACBICI.randomprocess.KOHGaussianProcess method)
(src.ACBICI.randomprocess.randomProcess method)
eval_vect_withdisc() (src.ACBICI.randomprocess.inexpKOHGaussianProcess method)
(src.ACBICI.randomprocess.KOHGaussianProcess method)
evalkernel() (src.ACBICI.kernels.Expo method)
(src.ACBICI.kernels.kernel method)
(src.ACBICI.kernels.Matern32 method)
(src.ACBICI.kernels.Matern52 method)
(src.ACBICI.kernels.MultiTask method)
(src.ACBICI.kernels.RatQuad method)
(src.ACBICI.kernels.SqExpo method)
expensiveCalibrator (class in src.ACBICI.calibrator)
expensiveGaussianProcess (class in src.ACBICI.randomprocess)
Expo (class in src.ACBICI.kernels)
F
findApproximateMAP() (in module src.ACBICI.calibrator)
fit() (src.ACBICI.vbmc.DiagonalVBmc method)
(src.ACBICI.vbmc.VBmc method)
G
Gamma (class in src.ACBICI.priors)
gaussianLogLikelihood() (src.ACBICI.calibrator.Calibrator method)
GaussianProcess (class in src.ACBICI.gprocess)
generateSyntheticData() (src.ACBICI.calibrator.Calibrator method)
genericCalibration() (src.ACBICI.calibrator.Calibrator method)
getAllLabels() (src.ACBICI.calibrator.Calibrator method)
getExperimentalSTD() (src.ACBICI.calibrator.Calibrator method)
getInputDimension() (src.ACBICI.calibrator.ACBICImodel method)
getNHyper() (src.ACBICI.calibrator.Calibrator method)
getNParam() (src.ACBICI.calibrator.ACBICImodel method)
(src.ACBICI.calibrator.Calibrator method)
getNPHE() (src.ACBICI.calibrator.Calibrator method)
getOutputDimension() (src.ACBICI.calibrator.ACBICImodel method)
(src.ACBICI.calibrator.discrepancyCalibrator method)
(src.ACBICI.calibrator.expensiveCalibrator method)
(src.ACBICI.calibrator.KOHCalibrator method)
guessInterval() (src.ACBICI.priors.prior method)
H
HalfCauchy (class in src.ACBICI.priors)
HalfNormal (class in src.ACBICI.priors)
I
inexpKOHGaussianProcess (class in src.ACBICI.randomprocess)
info() (src.ACBICI.gprocess.GaussianProcess method)
is_function_effectively_empty() (in module src.ACBICI.calibrator)
K
kernel (class in src.ACBICI.kernels)
KOHCalibrator (class in src.ACBICI.calibrator)
KOHGaussianProcess (class in src.ACBICI.randomprocess)
L
log_multivariate_normal_pdf() (in module src.ACBICI.calibrator)
log_multivariate_normal_pdf_sparse() (in module src.ACBICI.calibrator)
logLikelihood_vect() (src.ACBICI.calibrator.Calibrator method)
(src.ACBICI.calibrator.classicalCalibrator method)
(src.ACBICI.calibrator.discrepancyCalibrator method)
(src.ACBICI.calibrator.expensiveCalibrator method)
(src.ACBICI.calibrator.KOHCalibrator method)
logPosterior() (src.ACBICI.calibrator.Calibrator method)
logPriors() (src.ACBICI.calibrator.Calibrator method)
logProbability() (src.ACBICI.priors.prior method)
M
Matern32 (class in src.ACBICI.kernels)
Matern52 (class in src.ACBICI.kernels)
mcmcCalibration() (src.ACBICI.calibrator.Calibrator method)
module
src
src.ACBICI.calibrator
src.ACBICI.gprocess
src.ACBICI.kernels
src.ACBICI.priors
src.ACBICI.randomprocess
src.ACBICI.vbmc
MultiTask (class in src.ACBICI.kernels)
N
Normal (class in src.ACBICI.priors)
P
pdf() (src.ACBICI.priors.prior method)
PHEbounds() (src.ACBICI.calibrator.Calibrator method)
PHEguess() (src.ACBICI.calibrator.Calibrator method)
plot() (src.ACBICI.calibrator.Calibrator method)
(src.ACBICI.calibrator.classicalCalibrator method)
(src.ACBICI.calibrator.discrepancyCalibrator method)
(src.ACBICI.calibrator.expensiveCalibrator method)
(src.ACBICI.calibrator.KOHCalibrator method)
plotCompare() (src.ACBICI.calibrator.classicalCalibrator method)
(src.ACBICI.calibrator.discrepancyCalibrator method)
(src.ACBICI.calibrator.expensiveCalibrator method)
(src.ACBICI.calibrator.KOHCalibrator method)
plotCompare_multix() (src.ACBICI.calibrator.classicalCalibrator method)
(src.ACBICI.calibrator.discrepancyCalibrator method)
(src.ACBICI.calibrator.expensiveCalibrator method)
(src.ACBICI.calibrator.KOHCalibrator method)
plotCorner() (src.ACBICI.calibrator.Calibrator method)
plotCorrelations() (src.ACBICI.calibrator.Calibrator method)
plotDiscrepancy() (src.ACBICI.calibrator.discrepancyCalibrator method)
(src.ACBICI.calibrator.KOHCalibrator method)
plotDiscrepancy_multix() (src.ACBICI.calibrator.discrepancyCalibrator method)
(src.ACBICI.calibrator.KOHCalibrator method)
plotPredictionErrors() (src.ACBICI.calibrator.Calibrator method)
plotPriorsPosteriors() (src.ACBICI.calibrator.Calibrator method)
plotTrace() (src.ACBICI.calibrator.Calibrator method)
ppf() (src.ACBICI.priors.prior method)
predictionError() (src.ACBICI.calibrator.Calibrator method)
print() (src.ACBICI.kernels.Expo method)
(src.ACBICI.kernels.kernel method)
(src.ACBICI.kernels.Matern32 method)
(src.ACBICI.kernels.Matern52 method)
(src.ACBICI.kernels.MultiTask method)
(src.ACBICI.kernels.RatQuad method)
(src.ACBICI.kernels.SqExpo method)
(src.ACBICI.priors.Cauchy method)
(src.ACBICI.priors.Gamma method)
(src.ACBICI.priors.HalfCauchy method)
(src.ACBICI.priors.HalfNormal method)
(src.ACBICI.priors.Normal method)
(src.ACBICI.priors.prior method)
(src.ACBICI.priors.Uniform method)
(src.ACBICI.priors.Weibull method)
(src.ACBICI.randomprocess.expensiveGaussianProcess method)
(src.ACBICI.randomprocess.inexpKOHGaussianProcess method)
(src.ACBICI.randomprocess.KOHGaussianProcess method)
(src.ACBICI.randomprocess.randomProcess method)
printInfo() (src.ACBICI.calibrator.Calibrator method)
printlog() (src.ACBICI.calibrator.Calibrator method)
printReport() (src.ACBICI.calibrator.Calibrator method)
printStatistics() (in module src.ACBICI.calibrator)
prior (class in src.ACBICI.priors)
R
randomize() (src.ACBICI.calibrator.Calibrator method)
randomProcess (class in src.ACBICI.randomprocess)
randomSample() (src.ACBICI.priors.prior method)
RatQuad (class in src.ACBICI.kernels)
remove_extrarows() (src.ACBICI.calibrator.classicalCalibrator method)
(src.ACBICI.calibrator.discrepancyCalibrator method)
(src.ACBICI.calibrator.expensiveCalibrator method)
(src.ACBICI.calibrator.KOHCalibrator method)
remove_task_index() (src.ACBICI.calibrator.classicalCalibrator method)
(src.ACBICI.calibrator.discrepancyCalibrator method)
(src.ACBICI.calibrator.expensiveCalibrator method)
(src.ACBICI.calibrator.KOHCalibrator method)
replaceHyperparameterPrior() (src.ACBICI.calibrator.Calibrator method)
S
sample_posterior() (src.ACBICI.vbmc.DiagonalVBmc method)
(src.ACBICI.vbmc.VBmc method)
setDefaultExperimentalSTDPrior() (src.ACBICI.calibrator.Calibrator method)
setDefaultHyperparametersPriors() (src.ACBICI.calibrator.classicalCalibrator method)
(src.ACBICI.calibrator.discrepancyCalibrator method)
(src.ACBICI.calibrator.expensiveCalibrator method)
(src.ACBICI.calibrator.KOHCalibrator method)
setExperimentalSTDPrior() (src.ACBICI.calibrator.Calibrator method)
setExperimentalSTDValue() (src.ACBICI.calibrator.Calibrator method)
SqExpo (class in src.ACBICI.kernels)
src
module
src.ACBICI.calibrator
module
src.ACBICI.gprocess
module
src.ACBICI.kernels
module
src.ACBICI.priors
module
src.ACBICI.randomprocess
module
src.ACBICI.vbmc
module
storeExperimentalData() (src.ACBICI.calibrator.Calibrator method)
storePHE() (src.ACBICI.calibrator.Calibrator method)
storeSamples() (src.ACBICI.calibrator.classicalCalibrator method)
storeSyntheticData() (src.ACBICI.calibrator.Calibrator method)
symbolicModel() (src.ACBICI.calibrator.ACBICImodel method)
T
test() (src.ACBICI.gprocess.GaussianProcess static method)
(src.ACBICI.randomprocess.KOHGaussianProcess static method)
transformed_model() (src.ACBICI.calibrator.classicalCalibrator method)
(src.ACBICI.calibrator.discrepancyCalibrator method)
U
Uniform (class in src.ACBICI.priors)
V
VBmc (class in src.ACBICI.vbmc)
W
Weibull (class in src.ACBICI.priors)